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Navigating Complexities of Single Cell Curation: Raw Data to Curated Resource

Biological databases are notorious for poor data standards, and public single cell data is no exception.

The issues can be many: Lack of standards for cell-level metadata deposition, variable data processing pipelines or missing cell annotations.

In this webinar, our experts dive into these challenges and lessons learned while curating public single cell studies.

What You’ll Learn:

  • A tried and tested formula for assigning cell type identity to single cell clusters
  • Stitching raw single cell data at source (count matrix, cell annotations, marker information, metadata) into analysis-ready files
  • How Elucidata’s Polly enables retrieval and analysis of ~1700 curated single cell datasets.
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Real-World Applications We’ll Cover

  • Scaling clinico-genomic data integration: Large pharmaceutical organizations working with external data providers used Polly to build interoperable clinico-genomic data products 6x faster.
    Although purchased datasets are often labeled as "clean," they still lack interoperability—Polly's pipelines bridge this gap with robust integration and harmonization.

  • Information Retrieval: Drug safety monitoring teams used Polly's Knowledge Graph powered co-scientist to conversationally retrieve the right cohorts & assess drug response—cutting discovery time by 70%.

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What You’ll Learn

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Meet the Experts of this discussion
Key Takeaways
How data providers ensure adherence to quality standards through validation and compliance.
How GUI-based workflows, CLI tools, and collaborative workspaces enable streamlined data ingestion and synchronization at scale.
Understand how automated pipelines assess conformance, plausibility, and consistency, ensuring high-quality, AI-ready data products.
Key Takeaways
Reduce operational costs by streamlining data delivery through reusable, governed products.
Accelerate diagnostic development and clinical trial execution by delivering compliant, high-quality data at scale.
Improve audit readiness and regulatory confidence through governed data products and built-in quality assurance.
Equip cross-functional teams to act on trusted data—faster, and with greater confidence.
Who Should Attend?

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